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kptn kaptin (actin binding protein) [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133492043, updated on 10-Apr-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
See related
EnsemblRapid:ENSSBIG00005013097
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 18 NC_084657.1 (1372139..1386752)

Chromosome 18 - NC_084657.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 32b Neighboring gene H3 histone, family 3C Neighboring gene cone-rod homeobox Neighboring gene RNA-binding protein Nova-1-like Neighboring gene calpain, small subunit 1 a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084657.1 Chromosome 18 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084657.1 Reference ASM1980259v1 Primary Assembly

    Range
    1372139..1386752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061803941.1 → XP_061659925.1  KICSTOR complex protein kaptin isoform X1

    Related
    ENSSBIP00005026804.1, ENSSBIT00005028234.1

  2. XM_061803942.1 → XP_061659926.1  KICSTOR complex protein kaptin isoform X2

Nucleotide Protein
Heading Accession and Version

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