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tjp2a tight junction protein 2a (zona occludens 2) [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133490478, updated on 10-Apr-2024

Summary

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Gene symbol
tjp2a
Gene description
tight junction protein 2a (zona occludens 2)
See related
EnsemblRapid:ENSSBIG00005009359
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
Orthologs
zebrafish all
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Genomic context

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See tjp2a in Genome Data Viewer
Location:
chromosome: 17
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 17 NC_084656.1 (6435721..6505751, complement)

Chromosome 17 - NC_084656.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 30 member 5 Neighboring gene MAM domain-containing protein 2-like Neighboring gene uncharacterized LOC133490463 Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1b Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta a Neighboring gene ephrin-A5b-like Neighboring gene uncharacterized LOC133491048

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084656.1 Chromosome 17 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084656.1 Reference ASM1980259v1 Primary Assembly

    Range
    6435721..6505751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061800599.1 → XP_061656583.1  tight junction protein ZO-2a isoform X3

  2. XM_061800598.1 → XP_061656582.1  tight junction protein ZO-2a isoform X2

    Related
    ENSSBIP00005019562.1, ENSSBIT00005020201.1

  3. XM_061800597.1 → XP_061656581.1  tight junction protein ZO-2a isoform X2

  4. XM_061800596.1 → XP_061656580.1  tight junction protein ZO-2a isoform X1

    Related
    ENSSBIP00005019559.1, ENSSBIT00005020198.1
Nucleotide Protein
Heading Accession and Version

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