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p3h2 prolyl 3-hydroxylase 2 [ Phyllopteryx taeniolatus (common seadragon) ]

Gene ID: 133480551, updated on 29-Mar-2024

Summary

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Gene symbol
p3h2
Gene description
prolyl 3-hydroxylase 2
See related
EnsemblRapid:ENSPTLG00010005392
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllopteryx taeniolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phyllopteryx
Orthologs
human zebrafish all
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Genomic context

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See p3h2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Ptae_1.2 (GCF_024500385.1) 7 NC_084508.1 (23293487..23360836)

Chromosome 7 - NC_084508.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133481302 Neighboring gene claudin-1-like Neighboring gene coiled-coil domain containing 181 Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084508.1 Chromosome 7 Reference UOR_Ptae_1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500385.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Ptae_1.2 Primary Assembly

Genomic

  1. NC_084508.1 Reference UOR_Ptae_1.2 Primary Assembly

    Range
    23293487..23360836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061778773.1 → XP_061634757.1  prolyl 3-hydroxylase 2

    Related
    ENSPTLP00010011003.1, ENSPTLT00010012715.1

  2. XM_061778771.1 → XP_061634755.1  prolyl 3-hydroxylase 2

    Related
    ENSPTLP00010010999.1, ENSPTLT00010012711.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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