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LOC133479341 plectin-like [ Phyllopteryx taeniolatus (common seadragon) ]

Gene ID: 133479341, updated on 2-Jan-2024

Summary

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Gene symbol
LOC133479341
Gene description
plectin-like
See related
EnsemblRapid:ENSPTLG00010002168
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllopteryx taeniolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phyllopteryx
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Genomic context

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See LOC133479341 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Ptae_1.2 (GCF_024500385.1) 6 NC_084507.1 (6397472..6527154)

Chromosome 6 - NC_084507.1Genomic Context describing neighboring genes Neighboring gene hepcidin-like Neighboring gene uncharacterized LOC133479547 Neighboring gene microtubule actin crosslinking factor 1b Neighboring gene uncharacterized LOC133479344 Neighboring gene uncharacterized LOC133479343

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084507.1 Chromosome 6 Reference UOR_Ptae_1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500385.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Ptae_1.2 Primary Assembly

Genomic

  1. NC_084507.1 Reference UOR_Ptae_1.2 Primary Assembly

    Range
    6397472..6527154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061776172.1 → XP_061632156.1  plectin-like isoform X5

    Related
    ENSPTLP00010004150.1, ENSPTLT00010004998.1

  2. XM_061776174.1 → XP_061632158.1  plectin-like isoform X6

    Related
    ENSPTLP00010004145.1, ENSPTLT00010004993.1

  3. XM_061776182.1 → XP_061632166.1  plectin-like isoform X14

  4. XM_061776177.1 → XP_061632161.1  plectin-like isoform X9

    Related
    ENSPTLP00010004141.1, ENSPTLT00010004989.1

  5. XM_061776178.1 → XP_061632162.1  plectin-like isoform X10

  6. XM_061776171.1 → XP_061632155.1  plectin-like isoform X4

  7. XM_061776168.1 → XP_061632152.1  plectin-like isoform X1

  8. XM_061776170.1 → XP_061632154.1  plectin-like isoform X3

  9. XM_061776169.1 → XP_061632153.1  plectin-like isoform X2

    Related
    ENSPTLP00010004138.1, ENSPTLT00010004986.1

  10. XM_061776180.1 → XP_061632164.1  plectin-like isoform X12

    Related
    ENSPTLP00010004139.1, ENSPTLT00010004987.1

  11. XM_061776179.1 → XP_061632163.1  plectin-like isoform X11

    Related
    ENSPTLP00010004126.1, ENSPTLT00010004974.1

  12. XM_061776175.1 → XP_061632159.1  plectin-like isoform X7

    Related
    ENSPTLP00010004131.1, ENSPTLT00010004979.1

  13. XM_061776176.1 → XP_061632160.1  plectin-like isoform X8

  14. XM_061776181.1 → XP_061632165.1  plectin-like isoform X13

Nucleotide Protein
Heading Accession and Version

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