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dysf dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [ Phyllopteryx taeniolatus (common seadragon) ]

Gene ID: 133472695, updated on 29-Mar-2024

Summary

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Gene symbol
dysf
Gene description
dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)
See related
EnsemblRapid:ENSPTLG00010022236
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllopteryx taeniolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phyllopteryx
Orthologs
human zebrafish all
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Genomic context

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See dysf in Genome Data Viewer
Location:
chromosome: 23
Exon count:
60
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Ptae_1.2 (GCF_024500385.1) 23 NC_084524.1 (1642179..1666606, complement)

Chromosome 23 - NC_084524.1Genomic Context describing neighboring genes Neighboring gene triokinase/FMN cyclase Neighboring gene uncharacterized LOC133472758 Neighboring gene uncharacterized LOC133472761 Neighboring gene zinc finger protein 638 Neighboring gene type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B-like Neighboring gene uncharacterized LOC133472732

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084524.1 Chromosome 23 Reference UOR_Ptae_1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500385.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Ptae_1.2 Primary Assembly

Genomic

  1. NC_084524.1 Reference UOR_Ptae_1.2 Primary Assembly

    Range
    1642179..1666606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061763887.1 → XP_061619871.1  dysferlin isoform X1

  2. XM_061763892.1 → XP_061619876.1  dysferlin isoform X4

  3. XM_061763888.1 → XP_061619872.1  dysferlin isoform X2

  4. XM_061763893.1 → XP_061619877.1  dysferlin isoform X5

    Related
    ENSPTLP00010048322.1, ENSPTLT00010054182.1

  5. XM_061763891.1 → XP_061619875.1  dysferlin isoform X3

  6. XM_061763890.1 → XP_061619874.1  dysferlin isoform X3

  7. XM_061763894.1 → XP_061619878.1  dysferlin isoform X6

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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