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sgca sarcoglycan, alpha [ Phyllopteryx taeniolatus (common seadragon) ]

Gene ID: 133469714, updated on 29-Mar-2024

Summary

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Gene symbol
sgca
Gene description
sarcoglycan, alpha
See related
EnsemblRapid:ENSPTLG00010023980
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllopteryx taeniolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phyllopteryx
Orthologs
zebrafish all
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Genomic context

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See sgca in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Ptae_1.2 (GCF_024500385.1) 19 NC_084520.1 (9416004..9423210)

Chromosome 19 - NC_084520.1Genomic Context describing neighboring genes Neighboring gene PR domain containing 9 Neighboring gene uncharacterized LOC133469715 Neighboring gene protein phosphatase 1, regulatory subunit 9Bb Neighboring gene collagen, type I, alpha 1b Neighboring gene uncharacterized LOC133469315 Neighboring gene inactive all-trans-retinol 13,14-reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084520.1 Chromosome 19 Reference UOR_Ptae_1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500385.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Ptae_1.2 Primary Assembly

Genomic

  1. NC_084520.1 Reference UOR_Ptae_1.2 Primary Assembly

    Range
    9416004..9423210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061757124.1 → XP_061613108.1  alpha-sarcoglycan

    Related
    ENSPTLP00010051199.1, ENSPTLT00010057906.1
Nucleotide Protein
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