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chrna1 cholinergic receptor, nicotinic, alpha 1 (muscle) [ Cololabis saira (Pacific saury) ]

Gene ID: 133463527, updated on 9-Jul-2024

Summary

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Gene symbol
chrna1
Gene description
cholinergic receptor, nicotinic, alpha 1 (muscle)
See related
EnsemblRapid:ENSLTZG00000014291
Gene type
protein coding
RefSeq status
MODEL
Organism
Cololabis saira
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Belonidae; Cololabis
Orthologs
human zebrafish all
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Genomic context

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See chrna1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_12 current fColSai1.1 (GCF_033807715.1) 17 NC_084603.1 (30870134..30888672, complement)

Chromosome 17 - NC_084603.1Genomic Context describing neighboring genes Neighboring gene homeobox protein Hox-D9b-like Neighboring gene lunapark, ER junction formation factor Neighboring gene cadherin 11, type 2, OB-cadherin (osteoblast) Neighboring gene minichromosome maintenance 8 homologous recombination repair factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084603.1 Chromosome 17 Reference fColSai1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807715.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fColSai1.1 Primary Assembly

Genomic

  1. NC_084603.1 Reference fColSai1.1 Primary Assembly

    Range
    30870134..30888672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061745104.1 → XP_061601088.1  acetylcholine receptor subunit alpha

    Related
    ENSLTZP00000006027.1, ENSLTZT00000017834.1
Nucleotide Protein
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