U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kirrel3b kirre like nephrin family adhesion molecule 3b [ Cololabis saira (Pacific saury) ]

Gene ID: 133441595, updated on 9-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
kirrel3b
Gene description
kirre like nephrin family adhesion molecule 3b
See related
EnsemblRapid:ENSLTZG00000029132
Gene type
protein coding
RefSeq status
MODEL
Organism
Cololabis saira
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Belonidae; Cololabis
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kirrel3b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_12 current fColSai1.1 (GCF_033807715.1) 4 NC_084590.1 (18277547..18461852)

Chromosome 4 - NC_084590.1Genomic Context describing neighboring genes Neighboring gene somatolactin alpha Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene uncharacterized LOC133442290 Neighboring gene BARX homeobox 2 Neighboring gene RNA binding motif protein 7

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_084590.1 Chromosome 4 Reference fColSai1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_033807715.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fColSai1.1 Primary Assembly

Genomic

  1. NC_084590.1 Reference fColSai1.1 Primary Assembly

    Range
    18277547..18461852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061719048.1 → XP_061575032.1  kin of IRRE-like protein 3 isoform X2

  2. XM_061719051.1 → XP_061575035.1  kin of IRRE-like protein 3 isoform X5

  3. XM_061719047.1 → XP_061575031.1  kin of IRRE-like protein 3 isoform X1

  4. XM_061719054.1 → XP_061575038.1  kin of IRRE-like protein 3 isoform X7

  5. XM_061719049.1 → XP_061575033.1  kin of IRRE-like protein 3 isoform X3

    Related
    ENSLTZP00000045051.1, ENSLTZT00000058393.1

  6. XM_061719050.1 → XP_061575034.1  kin of IRRE-like protein 3 isoform X4

    Related
    ENSLTZP00000045052.1, ENSLTZT00000058394.1

  7. XM_061719052.1 → XP_061575036.1  kin of IRRE-like protein 3 isoform X6

    Related
    ENSLTZP00000045044.1, ENSLTZT00000058386.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.