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LOC133420954 toll-like receptor 2 type-2 [ Cololabis saira (Pacific saury) ]

Gene ID: 133420954, updated on 9-Jul-2024

Summary

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Gene symbol
LOC133420954
Gene description
toll-like receptor 2 type-2
See related
EnsemblRapid:ENSLTZG00000015478
Gene type
protein coding
RefSeq status
MODEL
Organism
Cololabis saira
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Belonidae; Cololabis
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Genomic context

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See LOC133420954 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_12 current fColSai1.1 (GCF_033807715.1) 20 NC_084606.1 (5934058..5952381, complement)

Chromosome 20 - NC_084606.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD14 Neighboring gene ring finger protein 175 Neighboring gene toll-like receptor 2 type-2 Neighboring gene toll-like receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084606.1 Chromosome 20 Reference fColSai1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2 type-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807715.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fColSai1.1 Primary Assembly

Genomic

  1. NC_084606.1 Reference fColSai1.1 Primary Assembly

    Range
    5934058..5952381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061710839.1 → XP_061566823.1  toll-like receptor 2 type-2

    Related
    ENSLTZP00000009352.1, ENSLTZT00000021183.1
Nucleotide Protein
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