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dysf dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [ Cololabis saira (Pacific saury) ]

Gene ID: 133420773, updated on 9-Jul-2024

Summary

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Gene symbol
dysf
Gene description
dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)
See related
EnsemblRapid:ENSLTZG00000024593
Gene type
protein coding
RefSeq status
MODEL
Organism
Cololabis saira
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Belonidae; Cololabis
Orthologs
human zebrafish all
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Genomic context

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See dysf in Genome Data Viewer
Location:
chromosome: 20
Exon count:
58
Annotation release Status Assembly Chr Location
RS_2023_12 current fColSai1.1 (GCF_033807715.1) 20 NC_084606.1 (23991178..24107064, complement)

Chromosome 20 - NC_084606.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 6B Neighboring gene cytochrome P450 26B1 Neighboring gene C-reactive protein-like Neighboring gene C-reactive protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084606.1 Chromosome 20 Reference fColSai1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807715.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fColSai1.1 Primary Assembly

Genomic

  1. NC_084606.1 Reference fColSai1.1 Primary Assembly

    Range
    23991178..24107064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061710600.1 → XP_061566584.1  dysferlin isoform X7

    Related
    ENSLTZP00000033428.1, ENSLTZT00000046072.1

  2. XM_061710596.1 → XP_061566580.1  dysferlin isoform X3

  3. XM_061710597.1 → XP_061566581.1  dysferlin isoform X4

    Related
    ENSLTZP00000033429.1, ENSLTZT00000046073.1

  4. XM_061710593.1 → XP_061566577.1  dysferlin isoform X1

  5. XM_061710598.1 → XP_061566582.1  dysferlin isoform X5

    Related
    ENSLTZP00000033421.1, ENSLTZT00000046065.1

  6. XM_061710599.1 → XP_061566583.1  dysferlin isoform X6

  7. XM_061710594.1 → XP_061566578.1  dysferlin isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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