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tjp2a tight junction protein 2a (zona occludens 2) [ Phycodurus eques (leafy seadragon) ]

Gene ID: 133413343, updated on 10-Apr-2024

Summary

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Gene symbol
tjp2a
Gene description
tight junction protein 2a (zona occludens 2)
See related
EnsemblRapid:ENSPEQG00000006350
Gene type
protein coding
RefSeq status
MODEL
Organism
Phycodurus eques
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phycodurus
Orthologs
zebrafish all
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Genomic context

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See tjp2a in Genome Data Viewer
Location:
chromosome: 15
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Pequ_1.1 (GCF_024500275.1) 15 NC_084539.1 (5104970..5163399, complement)

Chromosome 15 - NC_084539.1Genomic Context describing neighboring genes Neighboring gene MAM domain-containing protein 2-like Neighboring gene solute carrier family 30 member 5 Neighboring gene amyloid-beta A4 precursor protein-binding family A member 1-like Neighboring gene phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like Neighboring gene ephrin-A5b-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084539.1 Chromosome 15 Reference UOR_Pequ_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500275.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Pequ_1.1

Genomic

  1. NC_084539.1 Reference UOR_Pequ_1.1

    Range
    5104970..5163399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061697592.1 → XP_061553576.1  tight junction protein ZO-2a isoform X3

  2. XM_061697599.1 → XP_061553583.1  tight junction protein ZO-2a isoform X9

  3. XM_061697594.1 → XP_061553578.1  tight junction protein ZO-2a isoform X5

  4. XM_061697598.1 → XP_061553582.1  tight junction protein ZO-2a isoform X8

  5. XM_061697593.1 → XP_061553577.1  tight junction protein ZO-2a isoform X4

  6. XM_061697590.1 → XP_061553574.1  tight junction protein ZO-2a isoform X1

    Related
    ENSPEQP00000015207.1, ENSPEQT00000015896.1

  7. XM_061697595.1 → XP_061553579.1  tight junction protein ZO-2a isoform X6

    Related
    ENSPEQP00000015205.1, ENSPEQT00000015894.1

  8. XM_061697596.1 → XP_061553580.1  tight junction protein ZO-2a isoform X7

    Related
    ENSPEQP00000015204.1, ENSPEQT00000015893.1

  9. XM_061697591.1 → XP_061553575.1  tight junction protein ZO-2a isoform X2

    Related
    ENSPEQP00000015208.1, ENSPEQT00000015897.1
Nucleotide Protein
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