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ctbp1 C-terminal binding protein 1 [ Phycodurus eques (leafy seadragon) ]

Gene ID: 133407601, updated on 10-Apr-2024

Summary

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Gene symbol
ctbp1
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSPEQG00000003823
Gene type
protein coding
RefSeq status
MODEL
Organism
Phycodurus eques
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phycodurus
Orthologs
zebrafish all
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Genomic context

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See ctbp1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Pequ_1.1 (GCF_024500275.1) 9 NC_084533.1 (12713885..12757783)

Chromosome 9 - NC_084533.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A/Ba Neighboring gene protein FAM53C-like Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene lysine (K)-specific demethylase 3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084533.1 Chromosome 9 Reference UOR_Pequ_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500275.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Pequ_1.1

Genomic

  1. NC_084533.1 Reference UOR_Pequ_1.1

    Range
    12713885..12757783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061685658.1 → XP_061541642.1  C-terminal-binding protein 1 isoform X1

  2. XM_061685661.1 → XP_061541645.1  C-terminal-binding protein 1 isoform X2

  3. XM_061685659.1 → XP_061541643.1  C-terminal-binding protein 1 isoform X1

  4. XM_061685660.1 → XP_061541644.1  C-terminal-binding protein 1 isoform X1

    Related
    ENSPEQP00000008181.1, ENSPEQT00000008787.1

  5. XM_061685662.1 → XP_061541646.1  C-terminal-binding protein 1 isoform X3

    Related
    ENSPEQP00000008175.1, ENSPEQT00000008781.1
Nucleotide Protein
Heading Accession and Version

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