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LOC133406489 torsin-1A-interacting protein 2-like [ Phycodurus eques (leafy seadragon) ]

Gene ID: 133406489, updated on 10-Apr-2024

Summary

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Gene symbol
LOC133406489
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSPEQG00000008267
Gene type
protein coding
RefSeq status
MODEL
Organism
Phycodurus eques
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phycodurus
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Genomic context

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See LOC133406489 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Pequ_1.1 (GCF_024500275.1) 8 NC_084532.1 (22802126..22809702)

Chromosome 8 - NC_084532.1Genomic Context describing neighboring genes Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene chemokine (C motif) receptor 1a, duplicate 1 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084532.1 Chromosome 8 Reference UOR_Pequ_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500275.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Pequ_1.1

Genomic

  1. NC_084532.1 Reference UOR_Pequ_1.1

    Range
    22802126..22809702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061684147.1 → XP_061540131.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSPEQP00000019871.1, ENSPEQT00000020595.1

  2. XM_061684146.1 → XP_061540130.1  torsin-1A-interacting protein 2-like isoform X1

  3. XM_061684148.1 → XP_061540132.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSPEQP00000019872.1, ENSPEQT00000020596.1
Nucleotide Protein
Heading Accession and Version

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