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LOC133401187 plectin-like [ Phycodurus eques (leafy seadragon) ]

Gene ID: 133401187, updated on 10-Apr-2024

Summary

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Gene symbol
LOC133401187
Gene description
plectin-like
See related
EnsemblRapid:ENSPEQG00000009094
Gene type
protein coding
RefSeq status
MODEL
Organism
Phycodurus eques
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Phycodurus
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Genomic context

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See LOC133401187 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
37
Annotation release Status Assembly Chr Location
RS_2023_12 current UOR_Pequ_1.1 (GCF_024500275.1) 4 NC_084528.1 (8626930..8751028)

Chromosome 4 - NC_084528.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133401917 Neighboring gene hepcidin-like Neighboring gene microtubule actin crosslinking factor 1b Neighboring gene solute carrier family 52 member 3-2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084528.1 Chromosome 4 Reference UOR_Pequ_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024500275.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOR_Pequ_1.1

Genomic

  1. NC_084528.1 Reference UOR_Pequ_1.1

    Range
    8626930..8751028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061673856.1 → XP_061529840.1  plectin-like isoform X6

  2. XM_061673866.1 → XP_061529850.1  plectin-like isoform X16

  3. XM_061673857.1 → XP_061529841.1  plectin-like isoform X7

  4. XM_061673858.1 → XP_061529842.1  plectin-like isoform X8

    Related
    ENSPEQP00000024337.1, ENSPEQT00000025098.1

  5. XM_061673865.1 → XP_061529849.1  plectin-like isoform X15

  6. XM_061673862.1 → XP_061529846.1  plectin-like isoform X12

  7. XM_061673863.1 → XP_061529847.1  plectin-like isoform X13

    Related
    ENSPEQP00000024332.1, ENSPEQT00000025093.1

  8. XM_061673849.1 → XP_061529833.1  plectin-like isoform X1

  9. XM_061673855.1 → XP_061529839.1  plectin-like isoform X5

  10. XM_061673850.1 → XP_061529834.1  plectin-like isoform X2

  11. XM_061673851.1 → XP_061529835.1  plectin-like isoform X3

    Related
    ENSPEQP00000022631.1, ENSPEQT00000023385.1

  12. XM_061673852.1 → XP_061529836.1  plectin-like isoform X4

  13. XM_061673864.1 → XP_061529848.1  plectin-like isoform X14

  14. XM_061673859.1 → XP_061529843.1  plectin-like isoform X9

  15. XM_061673860.1 → XP_061529844.1  plectin-like isoform X10

    Related
    ENSPEQP00000022594.1, ENSPEQT00000023348.1

  16. XM_061673861.1 → XP_061529845.1  plectin-like isoform X11

    Related
    ENSPEQP00000024096.1, ENSPEQT00000024855.1
Nucleotide Protein
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