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LOC133361243 TNF receptor-associated factor 2-like [ Lethenteron reissneri (Far Eastern brook lamprey) ]

Gene ID: 133361243, updated on 21-Dec-2023

Summary

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Gene symbol
LOC133361243
Gene description
TNF receptor-associated factor 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Lethenteron reissneri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
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Genomic context

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See LOC133361243 in Genome Data Viewer
Location:
chromosome: 71
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 71 NC_083849.1 (271719..292941)

Chromosome 71 - NC_083849.1Genomic Context describing neighboring genes Neighboring gene bromodomain-containing protein 2-like Neighboring gene WD repeat domain 5 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene ephrin type-A receptor 7-like Neighboring gene ephrin type-A receptor 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083849.1 Chromosome 71 Reference ASM1570882v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane signaling receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNF receptor-associated factor 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1570882v1 Primary Assembly

Genomic

  1. NC_083849.1 Reference ASM1570882v1 Primary Assembly

    Range
    271719..292941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061580146.1 → XP_061436130.1  TNF receptor-associated factor 2-like isoform X2

  2. XM_061580144.1 → XP_061436128.1  TNF receptor-associated factor 2-like isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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