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LOC133352610 calpain-1 catalytic subunit-like [ Lethenteron reissneri (Far Eastern brook lamprey) ]

Gene ID: 133352610, updated on 21-Dec-2023

Summary

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Gene symbol
LOC133352610
Gene description
calpain-1 catalytic subunit-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Lethenteron reissneri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
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Genomic context

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See LOC133352610 in Genome Data Viewer
Location:
chromosome: 41
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 41 NC_083819.1 (822880..846607)

Chromosome 41 - NC_083819.1Genomic Context describing neighboring genes Neighboring gene CLOCK interacting pacemaker Neighboring gene vascular endothelial growth factor A-like Neighboring gene inositol-tetrakisphosphate 1-kinase-like Neighboring gene anterior gradient protein 2 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083819.1 Chromosome 41 Reference ASM1570882v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-1 catalytic subunit-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1570882v1 Primary Assembly

Genomic

  1. NC_083819.1 Reference ASM1570882v1 Primary Assembly

    Range
    822880..846607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061568358.1 → XP_061424342.1  calpain-1 catalytic subunit-like isoform X1

  2. XM_061568359.1 → XP_061424343.1  calpain-1 catalytic subunit-like isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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