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HCFC1 host cell factor C1 [ Lethenteron reissneri (Far Eastern brook lamprey) ]

Gene ID: 133351738, updated on 29-Mar-2024

Summary

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Gene symbol
HCFC1
Gene description
host cell factor C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lethenteron reissneri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
Orthologs
human mouse all
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Genomic context

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See HCFC1 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 38 NC_083816.1 (6031883..6068034, complement)

Chromosome 38 - NC_083816.1Genomic Context describing neighboring genes Neighboring gene RAB29, member RAS oncogene family Neighboring gene WD repeat domain phosphoinositide-interacting protein 4-like Neighboring gene protein FAM72A-like Neighboring gene caveolin-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083816.1 Chromosome 38 Reference ASM1570882v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1570882v1 Primary Assembly

Genomic

  1. NC_083816.1 Reference ASM1570882v1 Primary Assembly

    Range
    6031883..6068034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061567200.1 → XP_061423184.1  host cell factor 1 isoform X2

  2. XM_061567202.1 → XP_061423186.1  host cell factor 1 isoform X4

  3. XM_061567199.1 → XP_061423183.1  host cell factor 1 isoform X1

  4. XM_061567201.1 → XP_061423185.1  host cell factor 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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