U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC133345803 toll-like receptor 2 [ Lethenteron reissneri (Far Eastern brook lamprey) ]

Gene ID: 133345803, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC133345803
Gene description
toll-like receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lethenteron reissneri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC133345803 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 23 NC_083801.1 (412261..422714, complement)

Chromosome 23 - NC_083801.1Genomic Context describing neighboring genes Neighboring gene protein mono-ADP-ribosyltransferase PARP14-like Neighboring gene U1 spliceosomal RNA Neighboring gene toll-like receptor 2 Neighboring gene uncharacterized LOC133345807

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_083801.1 Chromosome 23 Reference ASM1570882v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
toll-like receptor 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1570882v1 Primary Assembly

Genomic

  1. NC_083801.1 Reference ASM1570882v1 Primary Assembly

    Range
    412261..422714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061556792.1 → XP_061412776.1  toll-like receptor 2

  2. XM_061556791.1 → XP_061412775.1  toll-like receptor 2

  3. XM_061556793.1 → XP_061412777.1  toll-like receptor 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.