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POM121C POM121 transmembrane nucleoporin C [ Bos javanicus (banteng) ]

Gene ID: 133238621, updated on 29-Mar-2024

Summary

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Gene symbol
POM121C
Gene description
POM121 transmembrane nucleoporin C
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos javanicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See POM121C in Genome Data Viewer
Location:
chromosome: 25
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_12 current ARS-OSU_banteng_1.0 (GCF_032452875.1) 25 NC_083892.1 (33767575..33811553, complement)

Chromosome 25 - NC_083892.1Genomic Context describing neighboring genes Neighboring gene FKBP prolyl isomerase family member 6 (inactive) Neighboring gene E3 ubiquitin-protein ligase TRIM50 Neighboring gene NOP2/Sun RNA methyltransferase 5 Neighboring gene huntingtin interacting protein 1 Neighboring gene C-C motif chemokine ligand 26

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083892.1 Chromosome 25 Reference ARS-OSU_banteng_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear envelope pore membrane protein POM 121C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032452875.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-OSU_banteng_1.0 Primary Assembly

Genomic

  1. NC_083892.1 Reference ARS-OSU_banteng_1.0 Primary Assembly

    Range
    33767575..33811553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061401928.1 → XP_061257912.1  nuclear envelope pore membrane protein POM 121C isoform X2

  2. XM_061401927.1 → XP_061257911.1  nuclear envelope pore membrane protein POM 121C isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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