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IAQ61_002876 uncharacterized protein [ Leptosphaeria maculans (blackleg of rapeseed fungus) ]

Gene ID: 13292719, updated on 10-Jul-2024

Summary

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Gene symbol
IAQ61_002876
Gene description
uncharacterized protein
Locus tag
IAQ61_002876
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Leptosphaeria maculans (strain: CAN1, nat-host: oilseed rape)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Leptosphaeriaceae; Leptosphaeria; Leptosphaeria maculans species complex
Old locus tag
LEMA_P074890.1
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Genomic context

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See IAQ61_002876 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_027093932.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_027093932.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_065954568.1
  • SECRETED:SignalP(1-19,cutsite=ASA-AV,prob=0.3998)
    EggNog:ENOG41
    CAZy:PL3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_027093932.1 Reference assembly

    Range
    2518227..2519368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066095732.1 → XP_065954568.1  uncharacterized protein IAQ61_002876 [Leptosphaeria maculans]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases