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Pde9 phosphodiesterase 9 [ Bombus pascuorum ]

Gene ID: 132916113, updated on 10-Oct-2024

Summary

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Gene symbol
Pde9
Gene description
phosphodiesterase 9
See related
EnsemblRapid:ENSBPAG00000006840
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus pascuorum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Thoracobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See Pde9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_11 current iyBomPasc1.1 (GCF_905332965.1) 1 NC_083488.1 (2494477..2634055)

Chromosome 1 - NC_083488.1Genomic Context describing neighboring genes Neighboring gene Transcriptional adapter 2A Neighboring gene eukaryotic translation initiation factor 3 subunit g1 Neighboring gene Neprilysin 2 Neighboring gene uncharacterized LOC132914561 Neighboring gene cytochrome P450 6k1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083488.1 Chromosome 1 Reference iyBomPasc1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites. Schoonvaere K, et al. Front Microbiol, 2018. PMID 29491849, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC132916113

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905332965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomPasc1.1

Genomic

  1. NC_083488.1 Reference iyBomPasc1.1

    Range
    2494477..2634055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060975901.1 → XP_060831884.1  uncharacterized protein LOC132916113

  2. XM_060975900.1 → XP_060831883.1  uncharacterized protein LOC132916113

  3. XM_060975899.1 → XP_060831882.1  uncharacterized protein LOC132916113

    Related
    ENSBPAP00000010011.1, ENSBPAT00000018605.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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