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SWIP strumpellin and WASH-interacting protein [ Bombus pascuorum ]

Gene ID: 132914935, updated on 10-Oct-2024

Summary

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Gene symbol
SWIP
Gene description
strumpellin and WASH-interacting protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus pascuorum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Thoracobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See SWIP in Genome Data Viewer
Location:
chromosome: 15
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_11 current iyBomPasc1.1 (GCF_905332965.1) 15 NC_083502.1 (1325893..1329619)

Chromosome 15 - NC_083502.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL23-like Neighboring gene pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like Neighboring gene CUE domain-containing protein 1 Neighboring gene protein-lysine N-methyltransferase EEF2KMT Neighboring gene geranylgeranyl transferase type-2 subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083502.1 Chromosome 15 Reference iyBomPasc1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905332965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomPasc1.1

Genomic

  1. NC_083502.1 Reference iyBomPasc1.1

    Range
    1325893..1329619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060974458.1 → XP_060830441.1  WASH complex subunit 4

Nucleotide Protein
Heading Accession and Version

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