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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Tachysurus vachellii ]

Gene ID: 132854466, updated on 3-Apr-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus vachellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_11 current HZAU_Pvac_v1 (GCF_030014155.1) 12 NC_083471.1 (2515100..2548001, complement)

Chromosome 12 - NC_083471.1Genomic Context describing neighboring genes Neighboring gene scavenger receptor class A, member 5 (putative) Neighboring gene endoribonuclease ZC3H12A-like Neighboring gene cyclin dependent kinase 19 Neighboring gene adenosylmethionine decarboxylase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083471.1 Chromosome 12 Reference HZAU_Pvac_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014155.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_Pvac_v1 Primary Assembly

Genomic

  1. NC_083471.1 Reference HZAU_Pvac_v1 Primary Assembly

    Range
    2515100..2548001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060882887.1 → XP_060738870.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  2. XM_060882886.1 → XP_060738869.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  3. XM_060882888.1 → XP_060738871.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  4. XM_060882889.1 → XP_060738872.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  5. XM_060882891.1 → XP_060738874.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0AA88MXF2

  6. XM_060882890.1 → XP_060738873.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

Nucleotide Protein
Heading Accession and Version

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