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pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Tachysurus vachellii ]

Gene ID: 132844283, updated on 3-Apr-2024

Summary

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Gene symbol
pomgnt1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus vachellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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See pomgnt1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_11 current HZAU_Pvac_v1 (GCF_030014155.1) 4 NC_083463.1 (7851700..7866222)

Chromosome 4 - NC_083463.1Genomic Context describing neighboring genes Neighboring gene origin recognition complex, subunit 1 Neighboring gene pre-mRNA processing factor 38A Neighboring gene tetraspanin-1 Neighboring gene uncharacterized LOC132843925

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083463.1 Chromosome 4 Reference HZAU_Pvac_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014155.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_Pvac_v1 Primary Assembly

Genomic

  1. NC_083463.1 Reference HZAU_Pvac_v1 Primary Assembly

    Range
    7851700..7866222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060867537.1 → XP_060723520.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

    UniProtKB/TrEMBL
    A0AA88NGW7

  2. XM_060867538.1 → XP_060723521.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

    UniProtKB/TrEMBL
    A0AA88NGW7
Nucleotide Protein
Heading Accession and Version

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