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kptn kaptin (actin binding protein) [ Hemiscyllium ocellatum (epaulette shark) ]

Gene ID: 132836587, updated on 28-May-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
See related
EnsemblRapid:ENSHOEG00000015022
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemiscyllium ocellatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 47
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_11 current sHemOce1.pat.X.cur. (GCF_020745735.1) 47 NC_083447.1 (6157832..6178508, complement)

Chromosome 47 - NC_083447.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132836610 Neighboring gene sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) Neighboring gene ras and Rab interactor 3-like Neighboring gene alpha-soluble NSF attachment protein Neighboring gene seryl-tRNA synthetase 2, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083447.1 Chromosome 47 Reference sHemOce1.pat.X.cur.

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_020745735.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sHemOce1.pat.X.cur.

Genomic

  1. NC_083447.1 Reference sHemOce1.pat.X.cur.

    Range
    6157832..6178508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060855966.1 → XP_060711949.1  KICSTOR complex protein kaptin isoform X1

  2. XM_060855967.1 → XP_060711950.1  KICSTOR complex protein kaptin isoform X2

  3. XM_060855965.1 → XP_060711948.1  KICSTOR complex protein kaptin isoform X1

    Related
    ENSHOEP00000030124.1, ENSHOET00000034526.1
Nucleotide Protein
Heading Accession and Version

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