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pde9ab phosphodiesterase 9ab [ Hemiscyllium ocellatum (epaulette shark) ]

Gene ID: 132829552, updated on 28-May-2024

Summary

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Gene symbol
pde9ab
Gene description
phosphodiesterase 9ab
See related
EnsemblRapid:ENSHOEG00000020432
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemiscyllium ocellatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
Orthologs
zebrafish all
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Genomic context

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See pde9ab in Genome Data Viewer
Location:
chromosome: 29
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_11 current sHemOce1.pat.X.cur. (GCF_020745735.1) 29 NC_083429.1 (23858451..23932678)

Chromosome 29 - NC_083429.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 15 Neighboring gene small nucleolar RNA SNORA53 Neighboring gene solute carrier family 37 member 2 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transmembrane protein 218 Neighboring gene peptidyl-prolyl cis-trans isomerase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083429.1 Chromosome 29 Reference sHemOce1.pat.X.cur.

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_020745735.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sHemOce1.pat.X.cur.

Genomic

  1. NC_083429.1 Reference sHemOce1.pat.X.cur.

    Range
    23858451..23932678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060846795.1 → XP_060702778.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    ENSHOEP00000044227.1, ENSHOET00000049485.1
Nucleotide Protein
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Gene LinkOut

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