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elfn1a extracellular leucine-rich repeat and fibronectin type III domain containing 1a [ Hemiscyllium ocellatum (epaulette shark) ]

Gene ID: 132825608, updated on 12-Sep-2024

Summary

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Gene symbol
elfn1a
Gene description
extracellular leucine-rich repeat and fibronectin type III domain containing 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemiscyllium ocellatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
Orthologs
human zebrafish all
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Genomic context

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See elfn1a in Genome Data Viewer
Location:
chromosome: 20
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_11 current sHemOce1.pat.X.cur. (GCF_020745735.1) 20 NC_083420.1 (40512349..40528724, complement)

Chromosome 20 - NC_083420.1Genomic Context describing neighboring genes Neighboring gene mitotic arrest deficient 1 like 1 Neighboring gene protein ELFN1-like Neighboring gene transmembrane protein 184a Neighboring gene proteasome (prosome, macropain) assembly chaperone 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083420.1 Chromosome 20 Reference sHemOce1.pat.X.cur.

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ELFN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_020745735.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sHemOce1.pat.X.cur.

Genomic

  1. NC_083420.1 Reference sHemOce1.pat.X.cur.

    Range
    40512349..40528724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060840991.1 → XP_060696974.1  protein ELFN1

Nucleotide Protein
Heading Accession and Version

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