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LOC132822224 host cell factor 1-like [ Hemiscyllium ocellatum (epaulette shark) ]

Gene ID: 132822224, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132822224
Gene description
host cell factor 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemiscyllium ocellatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
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Genomic context

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See LOC132822224 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_11 current sHemOce1.pat.X.cur. (GCF_020745735.1) 14 NC_083414.1 (4561888..4677646, complement)

Chromosome 14 - NC_083414.1Genomic Context describing neighboring genes Neighboring gene H1.10 linker histone Neighboring gene RAB7a, member RAS oncogene family Neighboring gene ribophorin I Neighboring gene uncharacterized LOC132822227 Neighboring gene GATA-binding factor 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083414.1 Chromosome 14 Reference sHemOce1.pat.X.cur.

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_020745735.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sHemOce1.pat.X.cur.

Genomic

  1. NC_083414.1 Reference sHemOce1.pat.X.cur.

    Range
    4561888..4677646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060835325.1 → XP_060691308.1  host cell factor 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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