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LOC132815908 plectin-like [ Hemiscyllium ocellatum (epaulette shark) ]

Gene ID: 132815908, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132815908
Gene description
plectin-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Hemiscyllium ocellatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium
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Genomic context

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See LOC132815908 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_11 current sHemOce1.pat.X.cur. (GCF_020745735.1) 5 NC_083405.1 (141736175..141810262)

Chromosome 5 - NC_083405.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 15 Neighboring gene plectin-like Neighboring gene microtubule-actin cross-linking factor 1 Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083405.1 Chromosome 5 Reference sHemOce1.pat.X.cur.

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_020745735.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sHemOce1.pat.X.cur.

Genomic

  1. NC_083405.1 Reference sHemOce1.pat.X.cur.

    Range
    141736175..141810262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060825285.1 → XP_060681268.1  plectin-like

Nucleotide Protein
Heading Accession and Version

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