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LOC132752234 acetylcholine receptor subunit alpha-like [ Ruditapes philippinarum (Manila clam) ]

Gene ID: 132752234, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132752234
Gene description
acetylcholine receptor subunit alpha-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ruditapes philippinarum
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Ruditapes
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Genomic context

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See LOC132752234 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM2657151v2 (GCF_026571515.1) Unplaced Scaffold NW_026858135.1 (848381..851448, complement)

NW_026858135.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132752252 Neighboring gene neuronal acetylcholine receptor subunit beta-3-like Neighboring gene acetylcholine receptor subunit alpha-like Neighboring gene monocarboxylate transporter 12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026858135 Unplaced Scaffold Reference ASM2657151v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026571515.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2657151v2 Primary Assembly

Genomic

  1. NW_026858135.1 Reference ASM2657151v2 Primary Assembly

    Range
    848381..851448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060742551.1 → XP_060598534.1  acetylcholine receptor subunit alpha-like

Nucleotide Protein
Heading Accession and Version

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