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LOC132747288 dnaJ homolog subfamily B member 6-like [ Ruditapes philippinarum (Manila clam) ]

Gene ID: 132747288, updated on 25-Jan-2024

Summary

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Gene symbol
LOC132747288
Gene description
dnaJ homolog subfamily B member 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ruditapes philippinarum
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Ruditapes
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Genomic context

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See LOC132747288 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM2657151v2 (GCF_026571515.1) Unplaced Scaffold NW_026856675.1 (4009..62796)

NW_026856675.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase E3D-like Neighboring gene integrin alpha-V-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026856675 Unplaced Scaffold Reference ASM2657151v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Relaxed selection on male mitochondrial genes in DUI bivalves eases the need for mitonuclear coevolution. Maeda GP, et al. J Evol Biol, 2021 Nov. PMID 34533872, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026571515.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2657151v2 Primary Assembly

Genomic

  1. NW_026856675.1 Reference ASM2657151v2 Primary Assembly

    Range
    4009..62796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060736619.1 → XP_060592602.1  dnaJ homolog subfamily B member 6-like isoform X2

  2. XM_060736618.1 → XP_060592601.1  dnaJ homolog subfamily B member 6-like isoform X1

  3. XM_060736620.1 → XP_060592603.1  dnaJ homolog subfamily B member 6-like isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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