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ASXL1 ASXL transcriptional regulator 1 [ Panthera onca (jaguar) ]

Gene ID: 132666884, updated on 29-Mar-2024

Summary

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Gene symbol
ASXL1
Gene description
ASXL transcriptional regulator 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera onca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See ASXL1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_10 current Panthera_onca_HiC (GCF_028533385.1) 2 NC_083296.1 (107399314..107475617)

Chromosome 2 - NC_083296.1Genomic Context describing neighboring genes Neighboring gene protein O-fucosyltransferase 1 Neighboring gene kinesin family member 3B Neighboring gene nucleolar protein 4 like Neighboring gene uncharacterized LOC132666937 Neighboring gene COMM domain containing 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083296.1 Chromosome 2 Reference Panthera_onca_HiC Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxisome proliferator activated receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PR-DUB complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group protein ASXL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028533385.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panthera_onca_HiC Primary Assembly

Genomic

  1. NC_083296.1 Reference Panthera_onca_HiC Primary Assembly

    Range
    107399314..107475617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060615123.1 → XP_060471106.1  polycomb group protein ASXL1 isoform X5

  2. XM_060615131.1 → XP_060471114.1  polycomb group protein ASXL1 isoform X6

  3. XM_060615084.1 → XP_060471067.1  polycomb group protein ASXL1 isoform X1

  4. XM_060615112.1 → XP_060471095.1  polycomb group protein ASXL1 isoform X4

  5. XM_060615090.1 → XP_060471073.1  polycomb group protein ASXL1 isoform X2

  6. XM_060615101.1 → XP_060471084.1  polycomb group protein ASXL1 isoform X3

Nucleotide Protein
Heading Accession and Version

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