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LOC132627448 tRNA (carboxymethyluridine(34)-5-O)-methyltransferase [ Lycium barbarum (goji berry) ]

Gene ID: 132627448, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132627448
Gene description
tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Lycium barbarum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Lycieae; Lycium
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Genomic context

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See LOC132627448 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM1917538v2 (GCF_019175385.1) 2 NC_083338.1 (135684180..135687626, complement)

Chromosome 2 - NC_083338.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132627446 Neighboring gene uncharacterized protein At4g37920 Neighboring gene uncharacterized LOC132627449 Neighboring gene cyclase-like protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083338.1 Chromosome 2 Reference ASM1917538v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (carboxymethyluridine(34)-5-O)-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019175385.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1917538v2 Primary Assembly

Genomic

  1. NC_083338.1 Reference ASM1917538v2 Primary Assembly

    Range
    135684180..135687626 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060342798.1 → XP_060198781.1  tRNA (carboxymethyluridine(34)-5-O)-methyltransferase

Nucleotide Protein
Heading Accession and Version

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