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LOC132622282 carboxyl-terminal-processing peptidase 1, chloroplastic [ Lycium barbarum (goji berry) ]

Gene ID: 132622282, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132622282
Gene description
carboxyl-terminal-processing peptidase 1, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Lycium barbarum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Lycieae; Lycium
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Genomic context

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See LOC132622282 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM1917538v2 (GCF_019175385.1) 12 NC_083348.1 (78563051..78570945)

Chromosome 12 - NC_083348.1Genomic Context describing neighboring genes Neighboring gene coatomer subunit zeta-2-like Neighboring gene uncharacterized LOC132623353 Neighboring gene leucine-rich repeat extensin-like protein 5 Neighboring gene cold-regulated 413 inner membrane protein 2, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083348.1 Chromosome 12 Reference ASM1917538v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019175385.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1917538v2 Primary Assembly

Genomic

  1. NC_083348.1 Reference ASM1917538v2 Primary Assembly

    Range
    78563051..78570945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060336866.1 → XP_060192849.1  carboxyl-terminal-processing peptidase 1, chloroplastic

Nucleotide Protein
Heading Accession and Version

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