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LOC132600245 rhamnogalacturonan I rhamnosyltransferase 1-like [ Lycium barbarum (goji berry) ]

Gene ID: 132600245, updated on 30-Nov-2023

Summary

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Gene symbol
LOC132600245
Gene description
rhamnogalacturonan I rhamnosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Lycium barbarum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Lycieae; Lycium
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Genomic context

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See LOC132600245 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM1917538v2 (GCF_019175385.1) 1 NC_083337.1 (157894550..157898405, complement)

Chromosome 1 - NC_083337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132600198 Neighboring gene transcription factor BIM1-like Neighboring gene uncharacterized LOC132600262 Neighboring gene dof zinc finger protein DOF5.4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083337.1 Chromosome 1 Reference ASM1917538v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019175385.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1917538v2 Primary Assembly

Genomic

  1. NC_083337.1 Reference ASM1917538v2 Primary Assembly

    Range
    157894550..157898405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060313326.1 → XP_060169309.1  rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1

  2. XM_060313331.1 → XP_060169314.1  rhamnogalacturonan I rhamnosyltransferase 1-like isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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