U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC132183330 callose synthase 7-like [ Corylus avellana ]

Gene ID: 132183330, updated on 19-Sep-2023

Summary

Go to the top of the page Help
Gene symbol
LOC132183330
Gene description
callose synthase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Corylus avellana
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Betulaceae; Corylus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC132183330 in Genome Data Viewer
Location:
chromosome: ca5
Exon count:
42
Annotation release Status Assembly Chr Location
RS_2023_09 current CavTom2PMs-1.0 (GCF_901000735.1) ca5 NC_081545.1 (18581307..18609505, complement)

Chromosome ca5 - NC_081545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132181298 Neighboring gene uncharacterized LOC132181891 Neighboring gene uncharacterized LOC132181892 Neighboring gene putative callose synthase 6

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081545.1 Chromosome ca5 Reference CavTom2PMs-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
callose synthase 7-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_901000735.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CavTom2PMs-1.0 Primary Assembly

Genomic

  1. NC_081545.1 Reference CavTom2PMs-1.0 Primary Assembly

    Range
    18581307..18609505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059596741.1 → XP_059452724.1  callose synthase 7-like isoform X2

  2. XM_059596740.1 → XP_059452723.1  callose synthase 7-like isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases