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LOC132180501 callose synthase 12 [ Corylus avellana ]

Gene ID: 132180501, updated on 19-Sep-2023

Summary

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Gene symbol
LOC132180501
Gene description
callose synthase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Corylus avellana
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Betulaceae; Corylus
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Genomic context

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See LOC132180501 in Genome Data Viewer
Location:
chromosome: ca5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current CavTom2PMs-1.0 (GCF_901000735.1) ca5 NC_081545.1 (9598781..9606483)

Chromosome ca5 - NC_081545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132182543 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene small nucleolar RNA J33 Neighboring gene two pore calcium channel protein 1A-like Neighboring gene uncharacterized LOC132180553

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081545.1 Chromosome ca5 Reference CavTom2PMs-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the paclitaxel-producing endophytic fungus Penicillium aurantiogriseum NRRL 62431. Yang Y, et al. BMC Genomics, 2014 Jan 25. PMID 24460898, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_901000735.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CavTom2PMs-1.0 Primary Assembly

Genomic

  1. NC_081545.1 Reference CavTom2PMs-1.0 Primary Assembly

    Range
    9598781..9606483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059593354.1 → XP_059449337.1  callose synthase 12

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases