U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC132178410 rhamnogalacturonan I rhamnosyltransferase 1-like [ Corylus avellana ]

Gene ID: 132178410, updated on 19-Sep-2023

Summary

Go to the top of the page Help
Gene symbol
LOC132178410
Gene description
rhamnogalacturonan I rhamnosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Corylus avellana
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Betulaceae; Corylus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC132178410 in Genome Data Viewer
Location:
chromosome: ca4
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current CavTom2PMs-1.0 (GCF_901000735.1) ca4 NC_081544.1 (30925992..30929118, complement)

Chromosome ca4 - NC_081544.1Genomic Context describing neighboring genes Neighboring gene transcription factor BIM2 Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1-like Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1-like Neighboring gene uncharacterized LOC132179948

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081544.1 Chromosome ca4 Reference CavTom2PMs-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_901000735.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CavTom2PMs-1.0 Primary Assembly

Genomic

  1. NC_081544.1 Reference CavTom2PMs-1.0 Primary Assembly

    Range
    30925992..30929118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059590850.1 → XP_059446833.1  rhamnogalacturonan I rhamnosyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases