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LOC132173836 probable beta-1,3-galactosyltransferase 3 [ Corylus avellana ]

Gene ID: 132173836, updated on 19-Sep-2023

Summary

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Gene symbol
LOC132173836
Gene description
probable beta-1,3-galactosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Corylus avellana
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Betulaceae; Corylus
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Genomic context

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See LOC132173836 in Genome Data Viewer
Location:
chromosome: ca3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current CavTom2PMs-1.0 (GCF_901000735.1) ca3 NC_081543.1 (37290055..37297373)

Chromosome ca3 - NC_081543.1Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 11-like Neighboring gene 3-ketoacyl-CoA synthase 2-like Neighboring gene CASP-like protein 2D1 Neighboring gene autophagy-related protein 8C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081543.1 Chromosome ca3 Reference CavTom2PMs-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_901000735.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CavTom2PMs-1.0 Primary Assembly

Genomic

  1. NC_081543.1 Reference CavTom2PMs-1.0 Primary Assembly

    Range
    37290055..37297373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059585467.1 → XP_059441450.1  probable beta-1,3-galactosyltransferase 3 isoform X2

  2. XM_059585466.1 → XP_059441449.1  probable beta-1,3-galactosyltransferase 3 isoform X1

Nucleotide Protein
Heading Accession and Version

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