U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALKBH8 alkB homolog 8, tRNA methyltransferase [ Mustela nigripes (black-footed ferret) ]

Gene ID: 132028803, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
ALKBH8
Gene description
alkB homolog 8, tRNA methyltransferase
See related
EnsemblRapid:ENSMNGG00000021333
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela nigripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ALKBH8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current MUSNIG.SB6536 (GCF_022355385.1) 1 NC_081557.1 (100465107..100514750)

Chromosome 1 - NC_081557.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA61 Neighboring gene uncharacterized LOC132013171 Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene UPF0538 protein C2orf76 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081557.1 Chromosome 1 Reference MUSNIG.SB6536 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022355385.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MUSNIG.SB6536 Primary Assembly

Genomic

  1. NC_081557.1 Reference MUSNIG.SB6536 Primary Assembly

    Range
    100465107..100514750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059418254.1 → XP_059274237.1  alkylated DNA repair protein alkB homolog 8 isoform X2

  2. XM_059418243.1 → XP_059274226.1  alkylated DNA repair protein alkB homolog 8 isoform X1

    Related
    ENSMNGP00000030606.1, ENSMNGT00000038373.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.