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FAM20B FAM20B glycosaminoglycan xylosylkinase [ Mustela nigripes (black-footed ferret) ]

Gene ID: 132025481, updated on 10-Apr-2024

Summary

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Gene symbol
FAM20B
Gene description
FAM20B glycosaminoglycan xylosylkinase
See related
EnsemblRapid:ENSMNGG00000001955
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela nigripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See FAM20B in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current MUSNIG.SB6536 (GCF_022355385.1) 10 NC_081566.1 (23370297..23413688, complement)

Chromosome 10 - NC_081566.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene torsin family 3 member A Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin like 1 Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081566.1 Chromosome 10 Reference MUSNIG.SB6536 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosaminoglycan xylosylkinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022355385.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MUSNIG.SB6536 Primary Assembly

Genomic

  1. NC_081566.1 Reference MUSNIG.SB6536 Primary Assembly

    Range
    23370297..23413688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059412823.1 → XP_059268806.1  glycosaminoglycan xylosylkinase isoform X2

  2. XM_059412817.1 → XP_059268800.1  glycosaminoglycan xylosylkinase isoform X1

    Related
    ENSMNGP00000002833.1, ENSMNGT00000003526.1

  3. XM_059412822.1 → XP_059268805.1  glycosaminoglycan xylosylkinase isoform X1

  4. XM_059412820.1 → XP_059268803.1  glycosaminoglycan xylosylkinase isoform X1

  5. XM_059412821.1 → XP_059268804.1  glycosaminoglycan xylosylkinase isoform X1

  6. XM_059412819.1 → XP_059268802.1  glycosaminoglycan xylosylkinase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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