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GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 [ Mustela nigripes (black-footed ferret) ]

Gene ID: 132024491, updated on 10-Apr-2024

Summary

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Gene symbol
GDPD5
Gene description
glycerophosphodiester phosphodiesterase domain containing 5
See related
EnsemblRapid:ENSMNGG00000024120
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela nigripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See GDPD5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current MUSNIG.SB6536 (GCF_022355385.1) 1 NC_081557.1 (50960808..51044175, complement)

Chromosome 1 - NC_081557.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD15 Neighboring gene ribosomal protein S3 Neighboring gene kelch like family member 35 Neighboring gene serpin family H member 1 Neighboring gene microtubule associated protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081557.1 Chromosome 1 Reference MUSNIG.SB6536 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerophosphodiester phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiester phosphodiesterase domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022355385.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MUSNIG.SB6536 Primary Assembly

Genomic

  1. NC_081557.1 Reference MUSNIG.SB6536 Primary Assembly

    Range
    50960808..51044175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059411044.1 → XP_059267027.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

  2. XM_059411064.1 → XP_059267047.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

    Related
    ENSMNGP00000034376.1, ENSMNGT00000043238.1

  3. XM_059411016.1 → XP_059266999.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    Related
    ENSMNGP00000034378.1, ENSMNGT00000043240.1

  4. XM_059411026.1 → XP_059267009.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

  5. XM_059411053.1 → XP_059267036.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

  6. XM_059411035.1 → XP_059267018.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

Nucleotide Protein
Heading Accession and Version

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