U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NFATC1 nuclear factor of activated T cells 1 [ Mustela nigripes (black-footed ferret) ]

Gene ID: 132023704, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
NFATC1
Gene description
nuclear factor of activated T cells 1
See related
EnsemblRapid:ENSMNGG00000009721
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela nigripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NFATC1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current MUSNIG.SB6536 (GCF_022355385.1) 8 NC_081564.1 (90989343..91083337)

Chromosome 8 - NC_081564.1Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 9B (putative) Neighboring gene uncharacterized LOC132023703 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene CTD phosphatase subunit 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081564.1 Chromosome 8 Reference MUSNIG.SB6536 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nuclear factor of activated T-cells, cytoplasmic 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022355385.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MUSNIG.SB6536 Primary Assembly

Genomic

  1. NC_081564.1 Reference MUSNIG.SB6536 Primary Assembly

    Range
    90989343..91083337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059409855.1 → XP_059265838.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X1

    Related
    ENSMNGP00000013706.1, ENSMNGT00000017460.1

  2. XM_059409858.1 → XP_059265841.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X3

  3. XM_059409859.1 → XP_059265842.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X4

  4. XM_059409860.1 → XP_059265843.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X5

    Related
    ENSMNGP00000013702.1, ENSMNGT00000017456.1

  5. XM_059409861.1 → XP_059265844.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X6

  6. XM_059409862.1 → XP_059265845.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X7

  7. XM_059409856.1 → XP_059265839.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X2

    Related
    ENSMNGP00000013695.1, ENSMNGT00000017449.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.