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HCFC1 host cell factor C1 [ Mustela nigripes (black-footed ferret) ]

Gene ID: 132007437, updated on 10-Apr-2024

Summary

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Gene symbol
HCFC1
Gene description
host cell factor C1
See related
EnsemblRapid:ENSMNGG00000008114
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela nigripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See HCFC1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_09 current MUSNIG.SB6536 (GCF_022355385.1) X NC_081575.1 (1546580..1568559)

Chromosome X - NC_081575.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor associated kinase 1 Neighboring gene transmembrane protein 187 Neighboring gene renin binding protein Neighboring gene N-alpha-acetyltransferase 10, NatA catalytic subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081575.1 Chromosome X Reference MUSNIG.SB6536 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022355385.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MUSNIG.SB6536 Primary Assembly

Genomic

  1. NC_081575.1 Reference MUSNIG.SB6536 Primary Assembly

    Range
    1546580..1568559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059385586.1 → XP_059241569.1  host cell factor 1 isoform X6

  2. XM_059385581.1 → XP_059241564.1  host cell factor 1 isoform X1

  3. XM_059385582.1 → XP_059241565.1  host cell factor 1 isoform X2

    Related
    ENSMNGP00000011425.1, ENSMNGT00000014650.1

  4. XM_059385583.1 → XP_059241566.1  host cell factor 1 isoform X3

  5. XM_059385585.1 → XP_059241568.1  host cell factor 1 isoform X5

  6. XM_059385584.1 → XP_059241567.1  host cell factor 1 isoform X4

Nucleotide Protein
Heading Accession and Version

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