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Cbl E3 ubiquitin-protein ligase CBL [ Tigriopus californicus ]

Gene ID: 131889760, updated on 3-Jul-2024

Summary

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Gene symbol
Cbl
Gene description
E3 ubiquitin-protein ligase CBL
Gene type
protein coding
RefSeq status
MODEL
Organism
Tigriopus californicus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Harpacticoida; Harpacticidae; Tigriopus
Orthologs
fruit fly all
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Genomic context

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See Cbl in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current Tcal_SD_v2.1 (GCF_007210705.1) 11 NC_081450.1 (9105710..9109390)

Chromosome 11 - NC_081450.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131890189 Neighboring gene protein Churchill-like Neighboring gene serine/threonine-protein phosphatase PP1-beta catalytic subunit Neighboring gene Ubiquitin-fold modifier conjugating enzyme 1 Neighboring gene uncharacterized LOC131889764 Neighboring gene glucose transporter GlcP-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081450.1 Chromosome 11 Reference Tcal_SD_v2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase CBL-B-A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007210705.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tcal_SD_v2.1

Genomic

  1. NC_081450.1 Reference Tcal_SD_v2.1

    Range
    9105710..9109390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059238932.1 → XP_059094915.1  E3 ubiquitin-protein ligase CBL-B-A-like

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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