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CAPN3 calpain 3 [ Mustela lutreola (European mink) ]

Gene ID: 131836166, updated on 28-Mar-2024

Summary

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Gene symbol
CAPN3
Gene description
calpain 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela lutreola
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See CAPN3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_08 current mMusLut2.pri (GCF_030435805.1) 7 NC_081296.1 (68606932..68657475)

Chromosome 7 - NC_081296.1Genomic Context describing neighboring genes Neighboring gene glucosidase alpha, neutral C Neighboring gene U4 spliceosomal RNA Neighboring gene small ribosomal subunit protein eS7-like Neighboring gene zinc finger protein 106 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene synaptosome associated protein 23 Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081296.1 Chromosome 7 Reference mMusLut2.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435805.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMusLut2.pri

Genomic

  1. NC_081296.1 Reference mMusLut2.pri

    Range
    68606932..68657475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059181272.1 → XP_059037255.1  calpain-3 isoform X1

  2. XM_059181273.1 → XP_059037256.1  calpain-3 isoform X2

  3. XM_059181274.1 → XP_059037257.1  calpain-3 isoform X3

  4. XM_059181275.1 → XP_059037258.1  calpain-3 isoform X4

  5. XM_059181276.1 → XP_059037259.1  calpain-3 isoform X5

  6. XM_059181278.1 → XP_059037261.1  calpain-3 isoform X6

  7. XM_059181277.1 → XP_059037260.1  calpain-3 isoform X6

  8. XM_059181279.1 → XP_059037262.1  calpain-3 isoform X7

Nucleotide Protein
Heading Accession and Version

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