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LOC131832701 proteasome subunit alpha type-1-like [ Mustela lutreola (European mink) ]

Gene ID: 131832701, updated on 23-Oct-2023

Summary

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Gene symbol
LOC131832701
Gene description
proteasome subunit alpha type-1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela lutreola
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
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Genomic context

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See LOC131832701 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_08 current mMusLut2.pri (GCF_030435805.1) 5 NC_081294.1 (163477912..163479083, complement)

Chromosome 5 - NC_081294.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 2L8-like Neighboring gene uncharacterized LOC131831258 Neighboring gene histo-blood group ABO system transferase-like Neighboring gene uncharacterized LOC131831260 Neighboring gene keratin, type II cytoskeletal 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081294.1 Chromosome 5 Reference mMusLut2.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435805.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMusLut2.pri

Genomic

  1. NC_081294.1 Reference mMusLut2.pri

    Range
    163477912..163479083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059176059.1 → XP_059032042.1  proteasome subunit alpha type-1-like isoform X1

  2. XM_059176060.1 → XP_059032043.1  proteasome subunit alpha type-1-like isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases