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ATG2A autophagy related 2A [ Mustela lutreola (European mink) ]

Gene ID: 131815013, updated on 28-Mar-2024

Summary

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Gene symbol
ATG2A
Gene description
autophagy related 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela lutreola
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ATG2A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2023_08 current mMusLut2.pri (GCF_030435805.1) 1 NC_081290.1 (282886716..282906445, complement)

Chromosome 1 - NC_081290.1Genomic Context describing neighboring genes Neighboring gene CDC42 binding protein kinase gamma Neighboring gene EH domain containing 1 Neighboring gene protein phosphatase 2 regulatory subunit B'beta Neighboring gene glycoprotein hormone subunit alpha 2 Neighboring gene uncharacterized LOC131815064 Neighboring gene membrane anchored junction protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081290.1 Chromosome 1 Reference mMusLut2.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 2 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435805.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMusLut2.pri

Genomic

  1. NC_081290.1 Reference mMusLut2.pri

    Range
    282886716..282906445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059146598.1 → XP_059002581.1  autophagy-related protein 2 homolog A isoform X2

  2. XM_059146588.1 → XP_059002571.1  autophagy-related protein 2 homolog A isoform X1

  3. XM_059146605.1 → XP_059002588.1  autophagy-related protein 2 homolog A isoform X3

Nucleotide Protein
Heading Accession and Version

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