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tjp2a tight junction protein 2a (zona occludens 2) [ Onychostoma macrolepis ]

Gene ID: 131548503, updated on 28-Mar-2024

Summary

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Gene symbol
tjp2a
Gene description
tight junction protein 2a (zona occludens 2)
Locus tag
G5714_010711
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostoma macrolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Acrossocheilinae; Onychostoma
Orthologs
zebrafish all
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Genomic context

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See tjp2a in Genome Data Viewer
Location:
chromosome: 10
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_08 current ASM1243209v1 (GCF_012432095.1) 10 NC_081164.1 (5147108..5176164, complement)

Chromosome 10 - NC_081164.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2, facilitated glucose transporter member 11-like Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1b Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta a Neighboring gene uncharacterized LOC131548679

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081164.1 Chromosome 10 Reference ASM1243209v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_012432095.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1243209v1 Primary Assembly

Genomic

  1. NC_081164.1 Reference ASM1243209v1 Primary Assembly

    Range
    5147108..5176164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058789818.1 → XP_058645801.1  tight junction protein ZO-2a isoform X3

  2. XM_058789817.1 → XP_058645800.1  tight junction protein ZO-2a isoform X2

  3. XM_058789816.1 → XP_058645799.1  tight junction protein ZO-2a isoform X1

Nucleotide Protein
Heading Accession and Version

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