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pnpla4 patatin-like phospholipase domain containing 4 [ Onychostoma macrolepis ]

Gene ID: 131546696, updated on 28-Mar-2024

Summary

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Gene symbol
pnpla4
Gene description
patatin-like phospholipase domain containing 4
Locus tag
G5714_000720
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostoma macrolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Acrossocheilinae; Onychostoma
Orthologs
human zebrafish all
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Genomic context

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See pnpla4 in Genome Data Viewer
Location:
chromosome: 01
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_08 current ASM1243209v1 (GCF_012432095.1) 01 NC_081155.1 (25024370..25038651)

Chromosome 01 - NC_081155.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131532403 Neighboring gene uncharacterized LOC131539390 Neighboring gene steroid sulfatase (microsomal), isozyme S Neighboring gene anosmin 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081155.1 Chromosome 01 Reference ASM1243209v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triglyceride lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_012432095.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1243209v1 Primary Assembly

Genomic

  1. NC_081155.1 Reference ASM1243209v1 Primary Assembly

    Range
    25024370..25038651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058786497.1 → XP_058642480.1  patatin-like phospholipase domain-containing protein 4 isoform X2

  2. XM_058786487.1 → XP_058642470.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7J6DHB7

  3. XM_058786514.1 → XP_058642497.1  patatin-like phospholipase domain-containing protein 4 isoform X4

  4. XM_058786524.1 → XP_058642507.1  patatin-like phospholipase domain-containing protein 4 isoform X4

  5. XM_058786504.1 → XP_058642487.1  patatin-like phospholipase domain-containing protein 4 isoform X3

Nucleotide Protein
Heading Accession and Version

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